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@PHDTHESIS{Mercurio:50820,
      author       = {Mercurio, Giuseppe},
      othercontributors = {Tautz, Frank Stefan},
      title        = {{S}tudy of molecule metal interfaces by means of the normal
                      incidence x-ray standing wave technique},
      volume       = {49},
      address      = {Aachen},
      publisher    = {Forschungszentrum Jülich, Zentralbibliothek [u.a.]},
      reportid     = {RWTH-CONV-113345},
      isbn         = {978-3-89336-816-7},
      series       = {Schriften des Forschungszentrums Jülich : Reihe
                      Schlüsseltechnologien},
      pages        = {XXII, 361 : Ill., graph. Darst.},
      year         = {2012},
      note         = {Ausgezeichnet mit dem Jülicher Exzellenz-Preis für
                      Nachwuchswissenschaftler/innen 2013.; Zugl.: Aachen, Techn.
                      Hochsch., Diss., 2012},
      abstract     = {Functional surfaces based on monolayers of organic
                      molecules are currently subject of an intense research
                      effort due to their applications in molecular electronics,
                      sensing and catalysis. Because of the strong dependence of
                      organic based devices on the local properties of the
                      molecule-metal interface, a direct investigation of the
                      interface chemistry is of paramount importance. In this
                      context, the bonding distance, measured by means of the
                      normal incidence x-ray standing wave technique (NIXSW),
                      provides a direct access to the molecule-metal interactions.
                      At the same time, NIXSW adsorption heights are used to
                      benchmark different density functional theory (DFT) schemes
                      and determine the ones with predictive power for similar
                      systems. This work investigates the geometric and chemical
                      properties of different molecule/metal interfaces, relevant
                      to molecular electronics and functional surfaces
                      applications, primarily by means of the NIXSW technique. All
                      NIXSW data are analyzed with the newly developed open source
                      program Torricelli, which is thoroughly documented in the
                      thesis. In order to elucidate the role played by the
                      substrate within molecule/metal interfaces, the prototype
                      organic molecule
                      3,4,9,10-perylene-tetracarboxylic-dianhydride (PTCDA) is
                      explored on the Ag(110) surface. The molecule results more
                      distorted and at smaller bonding distances on the more
                      reactive Ag(110) surface, in comparison with the Ag(100),
                      the Ag(111) and Au(111) substrates. This conclusion follows
                      from the detailed molecular adsorption geometry obtained
                      from the differential analysis of nonequivalent carbon and
                      oxygen species (including a careful error analysis).
                      Subsequently, the chemisorptive PTCDA/Ag(110) interaction is
                      tuned by the co-deposition of an external alkali metal,
                      namely K. As a consequence, the functional groups of PTCDA
                      unbind from the surface, which, in turn, undergoes major
                      reconstruction. In fact, the resulting nanopatterned surface
                      consists of alternated up and down reconstructed Ag terraces
                      covered by PTCDA molecules partly unbound with respect to
                      the pure molecular phase. This picture follows from a
                      combination of NIXSW, XPS, UPS, LEED and STM experiments.
                      Within the context of the functional surfaces, the
                      interaction of the molecular switches azobenzene (AB) and
                      3,3',5,5'-tetra-tert-butyl azobenzene (TBA) adsorbed on the
                      Ag(111) surface is investigated. The bonding distance of
                      TBA, only slightly greater compared to AB, indicates that
                      the desired geometric decoupling of the photochromic moiety
                      to enable the trans to cis switching in the adsorbate state
                      does not occur. In particular, the measured adsorption
                      heights of nitrogen, in excellent agreement with the
                      dispersion corrected DFT-PBE calculations, suggest that both
                      molecules are in the trans isomerization. Moreover, an
                      detailed adsorption geometry of AB and TBA, including the
                      carbon atoms, is obtained by means of the Fourier vector
                      analysis in the Argand diagram. This method allows the
                      multiple molecular degrees of freedom of large and flexible
                      molecules to be explored and provides structural parameters,
                      e.g., the phenyl ring tilt angle and torsion angle, with
                      unprecedented accuracy. Other functional surfaces that are
                      appealing for molecular electronics applications are the 2D
                      metal-organic networks. In this work, the self-assembled
                      monolayer of the prototypical molecular ligand terephthalic
                      acid (TPA) on the Cu(100) surface, prior to additional metal
                      deposition, is examined. NIXSW data reveal a significantly
                      distorted molecule with the carboxylate groups covalently
                      bound to the Cu atoms underneath and the carbon backbone
                      arc-like bent. This evidence suggests an intermolecular
                      interaction mediated by the substrate, as also supported by
                      previous HREELS measurements. Finally, the disagreement
                      between the experimental adsorption geometry and the DFT-PBE
                      prediction motivates further theoretical studies to improve
                      the understanding of this prototypical molecule-metal
                      interface.},
      keywords     = {Adsorbat (SWD) / A-15-Struktur (SWD) / Röntgenstrahlung
                      (SWD)},
      cin          = {134110 / 130000},
      ddc          = {530},
      cid          = {$I:(DE-82)134110_20140620$ / $I:(DE-82)130000_20140620$},
      shelfmark    = {61.05.jh * 68.37.Ef * 68.49.Uv * 68.43.Fg * 82.80.Pv},
      typ          = {PUB:(DE-HGF)11 / PUB:(DE-HGF)3},
      urn          = {urn:nbn:de:hbz:82-opus-42905},
      url          = {https://publications.rwth-aachen.de/record/50820},
}