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SUPRABIOTICS

Supramolecular Protective Groups Enabling Antibiotics and Bioimaging

CoordinatorUniversity of Groningen ; DWI LEIBNIZ-INSTITUT FUR INTERAKTIVE MATERIALIEN EV
Grant period2016-09-01 - 2022-01-31
Funding bodyEuropean Union
Call numberERC-2015-AdG
Grant number694610
IdentifierG:(EU-Grant)694610

Note: The pharmaceutical sector has a huge demand for new active compounds including natural products to fill the drug pipelines and to stop the global decline in novel approved active pharmaceutical ingredients. Therefore, developing new tools to fabricate complex molecular structures in a fast and reliable way is paramount. This holds especially true for the field of antibiotics. Multidrug resistant (MDR) pathogens evolve at a terrifying rate and confer resistance to all presently available antibacterial treatments and therefore WHO has identified MDR bacteria as major threat to human health. In this ERC Advanced Grant, I propose a radically new approach to fabricate very complex molecules with minimal synthetic effort. The technology is based on nucleic acid binders (aptamers), which are evolved in a selection protocol and block several functional groups within a target molecule while allowing other functionalities not in contact with the aptamer to be selectively modified in a single reaction step. Here, we aim to establish this groundbreaking aptameric protective group (APG) method as a novel tool that gives access to compounds that would otherwise be too difficult to obtain by multistep synthesis. Toward this end, the specific objectives are: • To develop reagents and reactions that are compatible with aptamer-mediated reactions • To control the site of chemical modification within complex molecules by APGs • To establish APGs as a general paradigm in natural product derivatization to modify several kinds of substrates • To achieve site selective modification of proteins by aptamers • To synthesize novel antibiotics that kill MDR bacteria • To fabricate “image-and-activate” antibiotics by the APG technology • To employ the aptamer-target complexes for live-cell imaging of RNA The outcomes will enable future advances in drug discovery and drug design, bioimaging technologies, and the site-specific modification of therapeutic proteins.
     

Recent Publications

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Fast, Efficient, and Targeted Liposome Delivery Mediated by DNA Hybridization
Advanced healthcare materials 8(14), 1900389 () [10.1002/adhm.201900389]  GO  Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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On the impact of competing intra- and intermolecular triplet-state quenching on photobleaching and photoswitching kinetics of organic fluorophores
Physical chemistry, chemical physics : PCCP 21(7), 3721-3733 () [10.1039/C8CP05063E]  GO OpenAccess  Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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DNA Nanotechnology Enters Cell Membranes
Advanced science 6(10), 1900043 () [10.1002/advs.201900043]  GO OpenAccess  Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Dissipative adaptation in driven self-assembly leading to self-dividing fibrils
Nature nanotechnology 13(9), 849-855 () [10.1038/s41565-018-0192-1]  GO  Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Genetically Engineered Supercharged Polypeptide Fluids : Fast and Persistent Self-Ordering Induced by Touch
Angewandte Chemie / International edition 57(23), 6878-6882 () [10.1002/anie.201803169]  GO  Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Phage Display on the Anti-infective Target 1-Deoxy- d -xylulose-5-phosphate Synthase Leads to an Acceptor-Substrate Competitive Peptidic Inhibitor
ChemBioChemm : a European journal of chemical biology 19(1), 58-65 () [10.1002/cbic.201700402]  GO  Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Photoswitching of DNA Hybridization Using a Molecular Motor
Journal of the American Chemical Society : JACS 140(15), 5069-5076 () [10.1021/jacs.7b09476]  GO OpenAccess  Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Performing DNA nanotechnology operations on a zebrafish
Chemical science 9(36), 7271-7276 () [10.1039/C8SC01771A]  GO OpenAccess  Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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DNA-surfactant complexes : self-assembly properties and applications
Chemical Society reviews : CSR 46(16), 5147-5172 () [10.1039/C7CS00165G]  GO  Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Accelerating chemical reactions by molecular sledding
Chemical communications 53(47), 6331-6334 () [10.1039/C7CC02500A]  GO  Download fulltext Files BibTeX | EndNote: XML, Text | RIS

All known publications ...
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 Record created 2016-11-21, last modified 2023-02-15



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