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@PHDTHESIS{Loevenich:781564,
      author       = {Loevenich, Johanna},
      othercontributors = {Blank, Lars M. and Wierckx, Nick},
      title        = {{O}ptimization of itaconic acid production by {U}. maydis
                      through metabolic engineering $\&$ adaptive laboratory
                      evolution; 1. {A}uflage},
      volume       = {14},
      school       = {RWTH Aachen University},
      type         = {Dissertation},
      address      = {Aachen},
      publisher    = {Apprimus Verlag},
      reportid     = {RWTH-2020-01372},
      series       = {Applied microbiology},
      pages        = {1 Online-Ressource (XIV, 123 Seiten) : Illustrationen,
                      Diagramme},
      year         = {2019},
      note         = {Veröffentlicht auf dem Publikationsserver der RWTH Aachen
                      University 2020; Dissertation, RWTH Aachen University, 2019},
      abstract     = {The incessant growth of the world population leads to an
                      already gigantic and still increasing demand for food,
                      energy, fuels, and chemicals. With the finiteness of fossil
                      resources as main feedstocks, a change from
                      petroleum-derived to sustainable, economically bio-based
                      production processes is indispensable to accomplish the
                      global needs. One of these processes is the production of
                      itaconic acid ranked as one of the top 12 value added
                      chemicals from biomass by the DoE. Nowadays, industrial
                      biotechnological production is performed by using the
                      filamentous fungus Aspergillus terreus. To circumvent the
                      challenges going along with such a filamentous production
                      host, alternatives are searched. In this context, the
                      Ustilaginaceae family including Ustilago maydis attracted
                      special attention. To establish an industrial itaconate
                      production host competitive to A. terreus and to
                      significantly improve the itaconate production performance
                      of U. maydis, two strategies were chased in this thesis:
                      metabolic engineering and adaptive laboratory evolution. By
                      the reduction of the diverse by-product spectrum of U.
                      maydis MB215 by the deletion of 2-hydroxy paraconate,
                      mannosyl-erythritol lipid, ustilagic acid and
                      triacylglycerol biosynthesis in combination with the
                      upregulation of ria1, the itaconate biosynthesis gene
                      cluster regulator, the flow of substrate could be
                      extensively pushed towards itaconate biosynthesis. This lead
                      to an itaconate titer increased by 10.2-fold compared to the
                      wildtype. Due to the upregulation of the
                      cis-aconitate/malate antiporter mtt1 as consequence of
                      ria1↑, the production of malate, another by-product, could
                      simultaneously be decreased by 84 $\%.In$ this by-product
                      reduced U. maydis strain, further metabolic engineering
                      steps were performed: filamentous growth prevention by fuz7
                      deletion and overexpression of mttA encoding for the A.
                      terreus mitochondrial tricarboxylate transporter. By
                      ∆fuz7, the designed strain was able to produce itaconate
                      with improved production parameters, especially with an
                      $25\%$ increased yield from glucose. This could even be
                      outplayed by additional PetefmttA insertion. A clone with
                      three PetefmttA copies reached an itaconate titer of 54 g
                      L-1 and a maximal yield of 0.64 gITA gglu-1, which
                      corresponds to 89 $\%$ of the theoretical value. The great
                      itaconate production improvements imply a higher metabolic
                      and osmotic stress level for the cells. Adaptive laboratory
                      evolution was therefore used to generate a strain with
                      increased low pH and product resistance to itaconate. The
                      fitness of U. maydis could be significantly improved
                      represented by strains able to grow at pH 4 and in the
                      presents of 40 g L-1 itaconate. The consolidation of all
                      major modifications identified in this thesis in one strain,
                      though, resulted in a loss of this tolerance. Especially the
                      deletion of triacylglycerol production, the cells rely on as
                      main energy reserves, seems to destabilize the cells in the
                      long term. However, the results clearly illustrate that the
                      final engineered strains feature great, far optimized
                      itaconate production parameters close to the theoretical
                      maximum making U. maydis - besides A. terreus - an
                      industrial relevant production host for itaconic acid.},
      cin          = {161710 / 160000},
      ddc          = {570},
      cid          = {$I:(DE-82)161710_20140620$ / $I:(DE-82)160000_20140620$},
      typ          = {PUB:(DE-HGF)11 / PUB:(DE-HGF)3},
      doi          = {10.18154/RWTH-2020-01372},
      url          = {https://publications.rwth-aachen.de/record/781564},
}