h1

530000-5 ; 925410

⇧ RWTH Aachen ⇧

Recent Publications

All known publications ...
Download: BibTeX | EndNote XML,  Text | RIS | 

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Dissertation / PhD Thesis Graßhoff, M.RWTH* ; Costa, I. G. (Thesis advisor)RWTH* ; Wagner, W. (Thesis advisor)RWTH*
A computational framework for the genotyping of single cell RNA sequencing data
Aachen : RWTH Aachen University 1 Online-Ressource : Illustrationen (2025) [10.18154/RWTH-2026-00479]2025 = Dissertation, RWTH Aachen University, 2025     Files BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Cesaro, G. ; Nagai, J. S.RWTH* ; Gnoato, N. ; Chiodi, A. ; Tussardi, G. ; Klöker, V.RWTH* ; Musumarra, C. V. ; Mosca, E. ; Costa, I. G.RWTH* ; Di Camillo, B. (Corresponding author) ; Calura, E. ; Baruzzo, G.
Advances and challenges in cell–cell communication inference: a comprehensive review of tools, resources, and future directions
Briefings in Bioinformatics 26(3), bbaf280 (2025) [10.1093/bib/bbaf280]2025     Files BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Joodaki, M.RWTH* ; Shaigan, M.RWTH* ; Samiei, S.RWTH* ; Nagai, J.RWTH* ; Maié, T.RWTH* ; Kuppe, C.RWTH* ; Costa, I. G. (Corresponding author)RWTH*
PILOT-GM-VAE: patient-level analysis of single-cell disease atlas with optimal transport of Gaussian mixture variational autoencoders
Briefings in Bioinformatics 26(5), bbaf547 (2025) [10.1093/bib/bbaf547]2025     Files BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Nagai, J. S. (Corresponding author)RWTH* ; Maié, T.RWTH* ; Schaub, M. T. (Corresponding author)RWTH* ; Costa, I. G. (Corresponding author)RWTH*
scACCorDiON: a clustering approach for explainable patient level cell–cell communication graph analysis
Bioinformatics 41(5), btaf288 (2025) [10.1093/bioinformatics/btaf288]2025     Files BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Gleitz, H. F. E.RWTH* ; Fuchs, S. N. R. ; Snoeren, I. A. M. ; Boys, C. ; Nagai, J.RWTH* ; Tejeda-Mora, H. ; Klöker, V.RWTH* ; Pritchard, J. E.RWTH* ; Bakker, I. J. ; Gargallo Garasa, M. ; Bindels, E. ; Saez-Rodriguez, J. ; Vogl, T. ; Kramann, R.RWTH* ; Dugourd, A. ; Costa, I. G.RWTH* ; Schneider, R. K. (Corresponding author)RWTH*
Inhibiting the alarmin-driven hematopoiesis-stromal cell crosstalk in primary myelofibrosis ameliorates bone marrow fibrosis
HemaSphere : open access journal of the European Hematology Association 9(8), e70179 (2025) [10.1002/hem3.70179]2025     Files BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Kuehl, M. (Corresponding author) ; Okabayashi, Y. (Corresponding author) ; Wong, M. N. ; et al
Pathology-oriented multiplexing enables integrative disease mapping
Nature : international weekly journal of science 644(8076), 516-526 (2025) [10.1038/s41586-025-09225-2]2025     Files BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Cheng, M.RWTH* ; Jansen, J.RWTH* ; Reimer, K. C.RWTH* ; Grande, V. P.RWTH* ; Nagai, J. S.RWTH* ; Li, Z. ; Kießling, P.RWTH* ; Grasshoff, M.RWTH* ; Kuppe, C.RWTH* ; Schaub, M. T.RWTH* ; Kramann, R. (Corresponding author)RWTH* ; Costa, I. G. (Corresponding author)RWTH*
PHLOWER leverages single-cell multimodal data to infer complex, multi-branching cell differentiation trajectories
Nature methods (2025) [10.1038/s41592-025-02870-5]2025     Files BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Subramanyam, S. H.RWTH* ; Hriczko, J. T.RWTH* ; Schulz, S.RWTH* ; Look, T.RWTH* ; Goodarzi, T.RWTH* ; Clarner, T. G.RWTH* ; Scheld, M.RWTH* ; Kipp, M. ; Verjans, E.RWTH* ; Böll, S.RWTH* ; Neullens, C. T.RWTH* ; Costa, I. G.RWTH* ; Li, Z.RWTH* ; Gan, L.RWTH* ; Denecke, B.RWTH* ; Schippers, A.RWTH* ; Floess, S. ; Huehn, J. ; Schmitt, E. ; Bopp, T. ; Wasmuth, H. ; Winograd, R. ; Beyaert, R. ; Lambrecht, B. ; Zenke, M.RWTH* ; Wagner, N.RWTH* ; Ohl, K.RWTH* ; Tenbrock, K. (Corresponding author)RWTH*
CREB regulates Foxp3+ST-2+ TREGS with enhanced IL-10 production
Frontiers in immunology 16, 1601008 (2025) [10.3389/fimmu.2025.1601008]2025     Files BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Preprint Schöneich, J.RWTH* ; Dupont, A.RWTH* ; Schlößer, S.RWTH* ; Schmitz, M.RWTH* ; Richter, I.RWTH* ; Gubbi, N. M. K. P.RWTH* ; Cheng, M.RWTH* ; Maié, T.RWTH* ; Jäverfelt, S. ; Imdahl, F. ; Toussaint, C. ; Saliba, A.-E. ; Kuppe, C.RWTH* ; Pelaseyed, T. ; Costa, I. G.RWTH* ; Hornef, M. W. (Corresponding author)RWTH*
Developmental factors drive the compartmentalised and discontinuous maturation of the small intestinal epithelium during the early postnatal period
43 Seiten (2025) [10.1101/2025.05.15.654215]2025     Files BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Merz, S. ; Senée, V. ; Philippi, A. ; Oswald, F. ; Shaigan, M.RWTH* ; Führer, M. ; Drewes, C. ; Allgöwer, C. ; Öllinger, R. ; Heni, M. ; Boland, A. ; Deleuze, J.-F. ; Birkhofer, F. ; Gusmao, E. G. ; Wagner, M. ; Hohwieler, M. ; Breunig, M. ; Rad, R. ; Siebert, R. ; Messerer, D. A. C. ; Costa, I. G.RWTH* ; Alvarez, F. ; Julier, C. (Corresponding author) ; Kleger, A. (Corresponding author) ; Heller, S. (Corresponding author)
A ONECUT1 regulatory, non-coding region in pancreatic development and diabetes
Cell reports 43(11), 114853 (2024) [10.1016/j.celrep.2024.114853]2024     Files BibTeX | EndNote: XML, Text | RIS

All known publications ...
Download: BibTeX | EndNote XML,  Text | RIS |